K. V. Lavrov, E. G. Grechishnikova, A. O. Shemyakina, A. H. Bernal Mungarro, M. S. Potapova, D. D. Derbikov & A. S. Yanenko Fluorescence Reporters turboGFP and turboRFP for Promoter Evaluation in Escherichia coli: Possibilities and Limitations.
Appl Biochem Microbiol 59, 1168–1176 (2023).
doi: 10.1134/S0003683823090107
Zhou H, Zheng C, Su J, Chen B, Fu Y, Xie Y, Tang Q, Chou SH, He J. Characterization of a natural triple-tandem c-di-GMP riboswitch and application of the riboswitch-based dual-fluorescence reporter.
Sci Rep. 2016 Feb 19;6:20871 doi: 10.1038/srep20871
pmid: 26892868
Yanaka Y, Muramatsu T, Uetake H, Kozaki KI, Inazawa J. miR-544a induces epithelial-mesenchymal transition through the activation of WNT signaling pathway in gastric cancer.
Carcinogenesis. 2015 Aug 11;pii: bgv106. [Epub ahead of print]
pmid: 26264654
Eremeeva EV, Markova SV, Vysotski ES. Highly active BRET-reporter based on yellow mutant of Renilla muelleri luciferase.
Dokl Biochem Biophys. 2013 May-Jun;450(1):147-50 doi: 10.1134/S1607672913030095
pmid: 23824457
Bonekamp NA, Islinger M, Lázaro MG, Schrader M. Cytochemical detection of peroxisomes and mitochondria.
Methods Mol Biol. 2013;931:467-82 doi: 10.1007/978-1-62703-056-4_24
pmid: 23027018
Cao C, Chen Y, Masood R, Sinha UK, Kobielak A. α-Catulin Marks the Invasion Front of Squamous Cell Carcinoma and Is Important for Tumor Cell Metastasis.
Mol Cancer Res. 2012 Jul;10(7):892-903 doi: 10.1158/1541-7786.MCR-12-0169
pmid: 22648798
Chang KT, Niescier RF, Min KT. Mitochondrial matrix Ca2+ as an intrinsic signal regulating mitochondrial motility in axons.
Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15456-61 doi: 10.1073/pnas.1106862108
pmid: 21876166
Rondanino C, Poland PA, Kinlough CL, Li H, Rbaibi Y, Myerburg MM, Al-bataineh MM, Kashlan OB, Pastor-Soler NM, Hallows KR, Weisz OA, Apodaca G, Hughey RP. Galectin-7 modulates the length of the primary cilia and wound repair in polarized kidney epithelial cells.
Am J Physiol Renal Physiol. 2011 Sep;301(3):F622-33 doi: 10.1152/ajprenal.00134.2011
pmid: 21677144
Hayashi K, Suzuki A, Hirai S, Kurihara Y, Hoogenraad CC, Ohno S. Maintenance of dendritic spine morphology by partitioning-defective 1b through regulation of microtubule growth.
J Neurosci. 2011 Aug 24;31(34):12094-103 doi: 10.1523/JNEUROSCI.0751-11.2011
pmid: 21865452
Wang L, Toomey NL, Diaz LA, Walker G, Ramos JC, Barber GN, Ning S. Oncogenic IRFs provide a survival advantage for Epstein-Barr virus- or human T-cell leukemia virus type 1-transformed cells through induction of BIC expression.
J Virol. 2011 Aug;85(16):8328-37 doi: 10.1128/JVI.00570-11
pmid: 21680528
McJunkin K, Mazurek A, Premsrirut PK, Zuber J, Dow LE, Simon J, Stillman B, Lowe SW. Reversible suppression of an essential gene in adult mice using transgenic RNA interference.
Proc Natl Acad Sci U S A. 2011 Apr 26;108(17):7113-8
pmid: 21482754
Meerbrey KL, Hu G, Kessler JD, Roarty K, Li MZ, Fang JE, Herschkowitz JI, Burrows AE, Ciccia A, Sun T, Schmitt EM, Bernardi RJ, Fu X, Bland CS, Cooper TA, Schiff R, Rosen JM, Westbrook TF, Elledge SJ. The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo.
Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3665-70 doi: 10.1073/pnas.1019736108
pmid: 21307310
Lin LT, Noyce RS, Pham TN, Wilson JA, Sisson GR, Michalak TI, Mossman KL, Richardson CD. Replication of subgenomic hepatitis C virus replicons in mouse fibroblasts is facilitated by deletion of interferon regulatory factor 3 and expression of liver-specific microRNA 122.
J Virol. 2010 Sep;84(18):9170-80 doi: 10.1128/JVI.00559-10
pmid: 20592082
Li ZH, Dulyaninova NG, House RP, Almo SC, Bresnick AR. S100A4 regulates macrophage chemotaxis.
Mol Biol Cell. 2010 Aug 1;21(15):2598-610 doi: 10.1091/mbc.E09-07-0609
pmid: 20519440
Torii T, Miyamoto Y, Sanbe A, Nishimura K, Yamauchi J, Tanoue A. Cytohesin-2/ARNO, through its interaction with focal adhesion adaptor protein paxillin, regulates preadipocyte migration via the downstream activation of Arf6.
J Biol Chem. 2010 Jul 30;285(31):24270-81 doi: 10.1074/jbc.M110.125658
pmid: 20525696
Shalek AK, Robinson JT, Karp ES, Lee JS, Ahn DR, Yoon MH, Sutton A, Jorgolli M, Gertner RS, Gujral TS, MacBeath G, Yang EG, Park H. Vertical silicon nanowires as a universal platform for delivering biomolecules into living cells.
Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):1870-5 doi: 10.1073/pnas.0909350107
pmid: 20080678
Suenaga T, Satoh T, Somboonthum P, Kawaguchi Y, Mori Y, Arase H. Myelin-associated glycoprotein mediates membrane fusion and entry of neurotropic herpesviruses.
Proc Natl Acad Sci U S A. 2010 Jan 12;107(2):866-71 doi: 10.1073/pnas.0913351107
pmid: 20080767
Pletnev S, Gurskaya NG, Pletneva NV, Lukyanov KA, Chudakov DM, Martynov VI, Popov VO, Kovalchuk MV, Wlodawer A, Dauter Z, Pletnev V. Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J Biol Chem. 2009 Nov 13;284(46):32028-39 doi: 10.1074/jbc.M109.054973
pmid: 19737938
Yip L, Su L, Sheng D, Chang P, Atkinson M, Czesak M, Albert PR, Collier AR, Turley SJ, Fathman CG, Creusot RJ. Deaf1 isoforms control the expression of genes encoding peripheral tissue antigens in the pancreatic lymph nodes during type 1 diabetes.
Nat Immunol. 2009 Sep;10(9):1026-33 doi: 10.1038/ni.1773
pmid: 19668219
Yamauchi J, Miyamoto Y, Torii T, Mizutani R, Nakamura K, Sanbe A, Koide H, Kusakawa S, Tanoue A. Valproic acid-inducible Arl4D and cytohesin-2/ARNO, acting through the downstream Arf6, regulate neurite outgrowth in N1E-115 cells.
Exp Cell Res. 2009 Jul 15;315(12):2043-52 doi: 10.1016/j.yexcr.2009.03.012
pmid: 19327349
Oswald C, Krause-Buchholz U, Rodel G. Knockdown of human COX17 affects assembly and supramolecular organization of cytochrome c oxidase.
J Mol Biol. 2009 Jun 12;389(3):470-9 doi: 10.1016/j.jmb.2009.04.034
pmid: 19393246
Samarkina ON, Popova AG, Gvozdik EY, Chkalina AV, Zvyagin IV, Rylova YV, Rudenko NV, Lusta KA, Kelmanson IV, Gorokhovatsky AY, Vinokurov LM. Universal and rapid method for purification of GFP-like proteins by the ethanol extraction.
Protein Expr Purif. 2009 May;65(1):108-13 doi: 10.1016/j.pep.2008.11.008
pmid: 19084068
al-Haj L, Al-Ahmadi W, Al-Saif M, Demirkaya O, Khabar KS. Cloning-free regulated monitoring of reporter and gene expression.
BMC Mol Biol. 2009 Mar 8;10:20 doi: 10.1186/1471-2199-10-20
pmid: 19267938
Held MA, Boulaflous A, Brandizzi F. Advances in fluorescent protein-based imaging for the analysis of plant endomembranes.
Plant Physiol. 2008 Aug;147(4):1469-81 doi: 10.1104/pp.108.120147
pmid: 18678739
Turchin IV, Kamensky VA, Plehanov VI, Orlova AG, Kleshnin MS, Fiks II, Shirmanova MV, Meerovich IG, Arslanbaeva LR, Jerdeva VV, Savitsky AP. Fluorescence diffuse tomography for detection of red fluorescent protein expressed tumors in small animals.
J Biomed Opt. 2008 Jul-Aug;13(4):041310 doi: 10.1117/1.2953528
pmid: 19021318
Yamauchi J, Miyamoto Y, Kusakawa S, Torii T, Mizutani R, Sanbe A, Nakajima H, Kiyokawa N, Tanoue A. Neurofibromatosis 2 tumor suppressor, the gene induced by valproic acid, mediates neurite outgrowth through interaction with paxillin.
Exp Cell Res. 2008 Jul 1;314(11-12):2279-88 doi: 10.1016/j.yexcr.2008.03.019
pmid: 18486129
Satoh T, Arii J, Suenaga T, Wang J, Kogure A, Uehori J, Arase N, Shiratori I, Tanaka S, Kawaguchi Y, Spear PG, Lanier LL, Arase H. PILRalpha is a herpes simplex virus-1 entry coreceptor that associates with glycoprotein B.
Cell. 2008 Mar 21;132(6):935-44 doi: 10.1016/j.cell.2008.01.043
pmid: 18358807
Miyamoto Y, Yamauchi J, Chan JR, Okada A, Tomooka Y, Hisanaga S, Tanoue A. Cdk5 regulates differentiation of oligodendrocyte precursor cells through the direct phosphorylation of paxillin.
J Cell Sci. 2007 Dec 15;120(Pt 24):4355-66
pmid: 18042622
Shaner NC, Patterson GH, Davidson MW. Advances in fluorescent protein technology.
J Cell Sci. 2007 Dec 15;120(Pt 24):4247-60
pmid: 18057027
Bell P, Vandenberghe LH, Wu D, Johnston J, Limberis M, Wilson JM. A comparative analysis of novel fluorescent proteins as reporters for gene transfer studies.
J Histochem Cytochem. 2007 Sep;55(9):931-9
pmid: 17510373
Kanemaru K, Okubo Y, Hirose K, Iino M. Regulation of neurite growth by spontaneous Ca2+ oscillations in astrocytes.
J Neurosci. 2007 Aug 15;27(33):8957-66
pmid: 17699677
Merzlyak EM, Goedhart J, Shcherbo D, Bulina ME, Shcheglov AS, Fradkov AF, Gaintzeva A, Lukyanov KA, Lukyanov S, Gadella TW, Chudakov DM. Bright monomeric red fluorescent protein with an extended fluorescence lifetime.
Nat Methods. 2007 Jul;4(7):555-7
pmid: 17572680
Mocz G. Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.
Mar Biotechnol (NY). 2007 May-Jun;9(3):305-28
pmid: 17372780